Add rows corresponding to censoring times to a longitudinal dataset
addcensoredrows.Rd
Add rows corresponding to censoring times to a longitudinal dataset
Arguments
- data
The dataset to which rows are to be added. The data should have one row per observation
- maxfu
The maximum follow-up time per subject. If all subjects have the same follow-up time, this can be supplied as a single number. Otherwise, maxfu should be a dataframe with the first column specifying subject identifiers and the second giving the follow-up time for each subject.
- tinvarcols
A vector of column numbers corresponding to variables in data that are time-invariant.
- id
character string indicating which column of the data identifies subjects
- time
character string indicating which column of the data contains the time at which the visit occurred
- event
character string indicating which column of the data indicates whether or not a visit occurred. If every row corresponds to a visit, then this column will consist entirely of ones
Examples
x <- c(1:3,1:2,1:5)
x0 <- c(rep(2,3),rep(0,2),rep(1,5))
id <- c(rep(1,3),rep(2,2),rep(3,5))
time <- c(0,4,6,2,3,1,3,5,6,7)
event <- c(1,1,1,0,1,0,1,1,1,1)
data <- as.data.frame(cbind(x,id,time,event,x0))
addcensoredrows(data,maxfu=8,id="id",time="time",tinvarcols=5,event="event")
#> x id time event x0
#> 1 1 1 0 1 2
#> 2 2 1 4 1 2
#> 3 3 1 6 1 2
#> 11 NA 1 8 0 2
#> 4 1 2 2 0 0
#> 5 2 2 3 1 0
#> 12 NA 2 8 0 0
#> 6 1 3 1 0 1
#> 7 2 3 3 1 1
#> 8 3 3 5 1 1
#> 9 4 3 6 1 1
#> 10 5 3 7 1 1
#> 13 NA 3 8 0 1
x <- c(1:3,1:2,1:5)
x0 <- c(rep(2,3),rep(0,2),rep(1,5))
id <- c(rep(1,3),rep(2,2),rep(3,5))
time <- c(0,4,6,2,3,1,3,5,6,7)
event <- c(1,1,1,0,1,0,1,1,1,1)
data <- as.data.frame(cbind(x,id,time,event,x0))
maxfu.id <- 1:3
maxfu.time <- c(6,5,8)
maxfu <- cbind(maxfu.id,maxfu.time)
maxfu <- as.data.frame(maxfu)
addcensoredrows(data,maxfu=maxfu,id="id",time="time",tinvarcols=5,event="event")
#> x id time event x0
#> 1 1 1 0 1 2
#> 2 2 1 4 1 2
#> 3 3 1 6 1 2
#> 4 1 2 2 0 0
#> 5 2 2 3 1 0
#> 11 NA 2 5 0 0
#> 6 1 3 1 0 1
#> 7 2 3 3 1 1
#> 8 3 3 5 1 1
#> 9 4 3 6 1 1
#> 10 5 3 7 1 1
#> 12 NA 3 8 0 1